An Atomistic Understanding of Allosteric Inhibition of Glutamate Racemase: a Dampening of Native Activation Dynamics

Glutamate racemases (GR) are members of the family of bacterial enzymes known as cofactor-independent racemases and epimerases and catalyze the stereoinversion of glutamate. D-amino acids are universally important for the proper construction of viable bacterial cell walls, and thus have been repeatedly validated as attractive targets for novel antimicrobial drug design. Significant aspects of the mechanism of this challenging stereoinversion remain unknown. The current study employs a combination of MD and QM/MM computational approaches to show that the GR from H. pylori must proceed via a pre-activation step, which is dependent on the enzyme's flexibility. This mechanism is starkly different from previously proposed mechanisms. These findings have immediate pharmaceutical relevance, as the H. pylori GR enzyme is a very attractive allosteric drug target. The results presented in this study offer a distinctly novel understanding of how AstraZeneca's lead series of inhibitors cripple the H. pylori GR's native motions, via prevention of this critical chemical pre-activation step. Our experimental studies, using SPR, fluorescence and NMR WaterLOGSY, show that H. pylori GR is not inhibited by the uncompetitive mechanism originally put forward by Lundqvist et al.. The current study supports a deep connection between native enzyme motions and chemical reactivity, which has strong relevance to the field of allosteric drug discovery.     

Effects of carbon nanotubes and interphase properties on the interfacial conductivity and electrical conductivity of polymer nanocomposites

L_c is the minimum length of carbon nanotubes (CNTs) required for efficient transfer of filler conductivity to polymer matrix in polymer CNT nanocomposites (PCNTs). In this work, L_c is correlated with the dimensions of the CNTs and the interphase thickness. Subsequently, the interfacial conductivity as well as the effective length and concentration of CNTs are expressed by CNT and interphase properties. Moreover, a simple model for the tunneling conductivity of PCNTs is developed with these effective terms. The impacts of all parameters on L_c, the interfacial conductivity, the fraction of CNTs in the networks and the conductivity of the PCNT are explained and justified. In addition, the predictions of the percolation threshold and conductivity are compared with the experimental results of several samples. The desirable values of interfacial conductivity are achieved by thin, short and super‐conductive CNTs, high waviness and a thick interphase. However, thin and long CNTs, low waviness, a thick interphase, poor tunneling resistivity due to the polymer matrix and a short tunneling distance advantageously affect the conductivity of PCNTs, because they produce large conductive networks. The predictions also show good agreement with the experimental measurements of percolation threshold and conductivity, which confirms the developed equations. © 2020 Society of Chemical Industry     

A Smart Flexible Solid State Photovoltaic Device with Interfacial Cooling Recovery Feature through Thermoreversible Polymer Gel Electrolyte

Quasi‐solid‐state dye‐sensitized solar cells (DSSCs) fabricated with lightweight flexible substrates have a great potential in wearable electronic devices for in situ powering. However, the poor lifespan of these DSSCs limits their practical application. Strong mechanical stresses involved in practical applications cause breakage of the electrode/electrolyte interface in the DSSCs greatly affecting their performance and lifetime. Here, a mechanically robust, low‐cost, long‐lasting, and environment‐friendly quasi‐solid‐state DSSC using a smart thermoreversible water‐based polymer gel electrolyte with self‐healing characteristics at a low temperature (below 0 °C) is demonstrated. When the performance of the flexible DSSC is hindered by strong mechanical stresses (i.e., from multiple bending/twisting/shrinking actions), a simple cooling treatment can regenerate the electrode/electrolyte interface and recover the performance close to the initial level. A performance recovery as high as 94% is proven possible even after 300 cycles of 90° bending. To the best of our knowledge, this is the first aqueous DSSC device with self‐healing behavior, using a smart thermoreversible polymer gel electrolyte, which provides a new perspective in flexible wearable solid‐state photovoltaic devices.     

Exergy analysis of the diesel pre-reforming solid oxide fuel cell system with anode off-gas recycling in the SchIBZ project. Part I: Modeling and validation

Solid oxide fuel cell (SOFC) systems with anode off-gas recirculation (AGR) and diesel pre-reforming are advantageous because they can operate with the current fuel infrastructure. In the SchIBZ-project, the prototype of such a SOFC system for maritime applications has already been commissioned. In this first paper, we model the system devices to conduct an exergy analysis of this real SOFC plant and validate them with experimental values from experiments in laboratory scale. The results of our simulation agree well with the experimental values. The calculations with the validated results may be closer to the real thermodynamic behavior of such system components than previous literature.     

Airborne bacterial assemblage in a zero carbon building: A case study

Currently, there is little information pertaining to the airborne bacterial communities of green buildings. In this case study, the air bacterial community of a zero carbon building (ZCB) in Hong Kong was characterized by targeting the bacterial 16S rRNA gene. Bacteria associated with the outdoor environment dominated the indoor airborne bacterial assemblage, with a modest contribution from bacteria associated with human skin. Differences in overall community diversity, membership, and composition associated with short (day‐to‐day) and long‐term temporal properties were detected, which may have been driven by specific environmental genera and taxa. Furthermore, time‐decay relationships in community membership (based on unweighted UniFrac distances) and composition (based on weighted UniFrac distances) differed depending on the season and sampling location. A Bayesian source‐tracking approach further supported the importance of adjacent outdoor air bacterial assemblage in sourcing the ZCB indoor bioaerosol. Despite the unique building attributes, the ZCB microbial assemblage detected and its temporal characteristics were not dissimilar to that of conventional built environments investigated previously. Future controlled experiments and microbial assemblage investigations of other ZCBs will undoubtedly uncover additional knowledge related to how airborne bacteria in green buildings may be influenced by their distinctive architectural attributes.     

Gel Polymer Electrolyte with Anion‐Trapping Boron Moieties via One‐Step Synthesis for Symmetrical Supercapacitors

A novel gel polymer electrolyte (GPE) which is based on new synthesized boron‐containing monomer, benzyl methacrylate, 1 m LiClO₄/N,N‐dimethylformamidel liquid electrolyte solution is prepared through a one‐step synthesis method. The boron‐containing GPE (B‐GPE) not only displays excellent mechanical behavior, favorable thermal stability, but also exhibits an outstanding ionic conductivity of 2.33 mS cm^?1 at room temperature owing to the presence of anion‐trapping boron sites. The lithium ion transference in this gel polymer film at ambient temperature is 0.60. Furthermore, the symmetrical supercapacitor which is fabricated with B‐GPE as electrolyte and reduced graphene oxide as electrode demonstrates a broad potential window of 2.3 V. The specific capacitance of symmetrical B‐GPE supercapacitors retains 90% after 3000 charge–discharge cycles at current density of 1 A g^?1.     

Activated Carbon Supported CaO from Waste Shells as a Catalyst for Biodiesel Production

In the wake of increasing environmental constraints, this work is aimed at developing a catalyst purely prepared from waste biomass source as the raw material. The catalyst is investigated for its applicability in transesterification of vegetable oil with the objectives: (i) to use waste shells of mollusk as raw material for the preparation of activated carbon and CaO; (ii) to use it as heterogeneous catalyst in the transesterification of waste cooking oil; (iii) to optimize the different parameters affecting the transesterification reaction; and (iv) to study its reusability. Under optimized conditions it was observed that a conversion >90% was possible and the catalyst could be reused five times with a slight loss in activity. This study indicates that the biomass source could also be used as a potential raw material in the synthesis of environmentally benign catalysts.     

Stability analysis and characterization of the nano emulsified Jatropha-curcas-based bio-fuel

This work investigates the suspension duration of the nanosized multiwalled carbon nanotubes (MWCNT) and aluminum oxide (Al₂O₃) in B20, B50 and B70 blends of Jatropha Methyl ester. The MWCNT and aluminum oxide (Al₂O₃) are added to the fuel blends in the proportions of 50 and 100 pmm separately by ultra sonication. The prepared fuel samples are characterized, and turbidity analysis was done to find the stability rate of nano-additives. The outcomes reveal the maximum stability rate for MWCNT and Al₂O₃ as 83.3% and 87.03%, respectively, with 50ppm in B20 over a period of eighteen days. A considerable drop in suspension was observed with the 100 ppm MWCNT and Al₂O₃ biodiesel blends.